Publications
2022
Strittmatter, M., Murúa, P., Arce, P., Perrineau, M. M. and Gachon, C. (2022). My seaweed looks weird: a community web portal to accelerate pathogen discovery in seaweeds. Applied Phycology, 1–6.
Jiang, L., Blommaert, L., Jansen, H. M., Broch, O. J., Timmermans, K. R. and Soetaert, K. (2022). Carrying capacity of Saccharina latissima cultivation in a Dutch coastal bay: a modelling assessment. ICES Journal of Marine Science, 79(3), 709–721.
Jansen, H.M., Bernard, M.S., Nederlof, M.A.J. et al. (2022). Seasonal variation in productivity, chemical composition and nutrient uptake of Ulva spp. (Chlorophyta) strains. Journal of Applied Phycology 34, 1649–1660.
Broch, O. J., Hancke, K., and Ellingsen, I. H. (2022). Dispersal and Deposition of Detritus From Kelp Cultivation. Frontiers in Marine Science, 9.
2021
Garcia Rodrigues, J., Villasante, S. and Sousa Pinto, I. (2021). Non-material nature’s contributions to people from a marine protected area support multiple dimensions of human well-being. Sustainability Science 17, 793–808.
Shapovalov, V., Kopanitsa, L., Pruteanu, L. L., Ladds, G. and Bailey, D. S. (2021). Transcriptomics-Based Phenotypic Screening Supports Drug Discovery in Human Glioblastoma Cells. Cancers, 13(15), 3780.
Jouanneau, D., Klau, L. J., Larocque, R., Jaffrennou, A., Duval, G., le Duff, N., Roret, T., Jeudy, A., Aachmann, F. L., Czjzek, M. and Thomas, F. (2021). Structure–function analysis of a new PL17 oligoalginate lyase from the marine bacterium Zobellia galactanivorans DsijT. Glycobiology.
Selnes, T., Giesbers, E. and van den Burg, S.W.K. (2021). Innovation and Collaboration: Opportunities for the European Seaweed Sector in Global Value Chains. Journal of Marine Science and Engineering 9, no. 7:693.
Fort, A., McHale, M., Cascella, K., Potin, P., Perrineau, M., Kerrison, P. D., Costa, E., Calado, R., Domingues, M. D. R., Costa Azevedo, I., Sousa‐Pinto, I., Gachon, C., Werf, A., Visser, W., Beniers, J. E., Jansen, H., Guiry, M. D., & Sulpice, R. (2021). Exhaustive reanalysis of barcode sequences from public repositories highlights ongoing misidentifications and impacts taxa diversity and distribution. Molecular Ecology Resources. Published.
Fort, A., Linderhof, C., Coca-Tagarro, I., Inaba, M., McHale, M., Cascella, K., Potin, P., Guiry, M. D., & Sulpice, R. (2021). A sequencing-free assay for foliose Ulva species identification, hybrid detection and bulk biomass characterisation. Algal Research, 55, 102280.
Martins, M., de Souza Mesquita, L. M., Vaz, B. M.C., Dias, A.C.R.V., Torres-Acosta, M. A., Quéguineur, B., Coutinho, J.A.P. and Ventura, S.P.M. (2021). Extraction and Fractionation of Pigments from Saccharina latissima (Linnaeus, 2006) Using an Ionic Liquid + Oil + Water System. ACS Sustainable Chemistry & Engineering, 9 (19) 6599–6612.
DOI: https://doi.org/10.1021/acssuschemeng.0c09110
The Supplementary Cover Art for the manuscript published in ACS Sustainable Chemistry & Engineering
Moreira, A. S. P., da Costa, E., Melo, T., Lopes, D., Pais, A. C. S., Santos, S. A. O., Pitarma, B., Mendes, M., Abreu, M. H., Collén, P. N., Domingues, P., and Domingues, M. R. (2021). Polar Lipids of Commercial Ulva of Different Origins: Profiling and Relevance for Seaweed Valorization. Foods, 10(5), 914.
DOI: https://doi.org/10.3390/foods10050914
Solvang, T., Bale, E.S., Broch, O.J., Handå, A. and Alver, M.O. (2021). Automation Concepts for Industrial-Scale Production of Seaweed. Frontiers in Marine Science 8:613093.
Lopes, D., Melo, T., Rey, F., Costa, E., Moreira, A. S., Abreu, M. H., Domingues, P., Lillebø, A. I., Calado, R., & Rosário Domingues, M. (2021). Insights of species-specific polar lipidome signatures of seaweeds fostering their valorization in the blue bioeconomy. Algal Research, 55, 102242.
Monteiro, J. P., Melo, T., Skjermo, J., Forbord, S., Broch, O. J., Domingues, P., Calado, R., and Domingues, M. R. (2021). Effect of harvesting month and proximity to fish farm sea cages on the lipid profile of cultivated Saccharina latissima. Algal Research, 54, 102201.
Xing, Q., Rousvoal, S. and Leblanc, C. (2021). Transcriptome-wide identification and evaluation of optimal reference genes for RT-qPCR expression analysis of Saccharina latissima responses to biotic and abiotic stress. Journal of Applied Phycology 33, 617–627.
2020
Murúa, P., Müller, D. G., Etemadi, M., West, P., & Gachon, C. M. M. (2020). Host and pathogen autophagy are central to the inducible local defences and systemic response of the giant kelp Macrocystis pyrifera against the oomycete pathogen Anisolpidium ectocarpii. New Phytologist, 226(5), 1445–1460.
Moreira, A. S. P., da Costa, E., Melo, T., Sulpice, R., Cardoso, S. M., Pitarma, B., Pereira, R., Abreu, M. H., Domingues, P., Calado, R., & Domingues, M. R. (2020). Seasonal plasticity of the polar lipidome of Ulva rigida cultivated in a sustainable integrated multi-trophic aquaculture. Algal Research, 49, 101958.
Calmes, B., Strittmatter, M., Jacquemin, B., Perrineau, M.-M., Rousseau, C., Badis, Y., Cock, J. M., Destombe, C., Valero, M., & Gachon, C. M. M. (2020). Parallelisable non-invasive biomass, fitness and growth measurement of macroalgae and other protists with nephelometry. Algal Research, 46, 101762.
van den Burg, S., Selnes, T., Alves, L., Giesbers, E., and Daniel, A. (2020). Prospects for upgrading by the European kelp sector. Journal of Applied Phycology
Guzinski, J., Ruggeri, P., Ballenghien, M., Mauger, S., Jacquemin, B., Jollivet, C., Coudret, J., Jaugeon, L., Destombe, C. and Valero, M. (2020). Seascape Genomics of the Sugar Kelp Saccharina latissima Along the North Eastern Atlantic Latitudinal Gradient. Genes 11, no. 12: 1503.
Fort, A., McHale, M., Cascella, K., Potin, P., Usadel, B., Guiry, M. and Sulpice, R. (2020). Foliose Ulva species show considerable inter‐specific genetic diversity, low intra‐specific genetic variation, and the rare occurrence of inter‐specific hybrids in the wild. Journal of Phycology. Accepted Author Manuscript.
Pruteanu, L., Kopanitsa, L., Módos, D., Kletnieks, E., Samarova, E., Bender, A., Gomez, L. and Bailey, D. (2020). Transcriptomics predicts compound synergy in drug and natural product treated glioblastoma cells. PLOS ONE, 15(9), p.e0239551.
Martins, M., Fernandes, A., Torres-Acosta, M., Collén, P., Abreu, M. and Ventura, S. (2020). Extraction of chlorophyll from wild and farmed Ulva spp. using aqueous solutions of ionic liquids. Separation and Purification Technology, 254, p.117589.
Da Costa, E; Ricardo, F; Melo, T; Mamede, R; Abreu, Maria H.; Domingues, P; Domingues, M. Rosário; and Calado, R. (2020). Site-Specific lipidomic signatures of sea lettuce (Ulva spp., Chlorophyta) hold the potential to trace their geographic origin, Biomolecules 10, 489.
Monteiro, J.P, Rey, F., Melo, T., Moreira, A., Arbona, J-F., Skjermo, J., Forbord, S., Funderud, J., Raposo, D., Kerrison, P., Perrineau, M-M., Gachon, C., Domingues, P., Calado R. and Domingues, M. R. (2020). The Unique Lipidomic Signatures of Saccharina latissima Can Be Used to Pinpoint Their Geographic Origin. Biomolecules, 10(1), p.107.
2019
Viborg, A. H., Terrapon, N., Lombard, V., Michel, G., Czjzek, M., Henrissat, B., & Brumer, H. (2019). A subfamily roadmap of the evolutionarily diverse glycoside hydrolase family 16 (GH16). Journal of Biological Chemistry, 294(44), 15973–15986.
Garvetto, A., Perrineau, M., Dressler‐Allame, M., Bresnan, E. and Gachon, C.. (2019). “Ectrogella” Parasitoids of the Diatom Licmophora sp. are Polyphyletic. Journal of Eukaryotic Microbiology, 67(1), pp.18-27.
Visch, W., Rad-Menéndez, C., Nylund, G., Pavia, H., Ryan, M. and Day, J. (2019). Underpinning the Development of Seaweed Biotechnology: Cryopreservation of Brown Algae (Saccharina latissima) Gametophytes. In: Biopreservation and Biobanking, 378-386.
Bringslid, I.H. (2019). Phosphorus in Saccharina latissima: Initial uptake, storage, and possibilities for recycling in IMTA systems. (Unpublished Master’s thesis) NTNU Norwegian University of Science and Technology, Trondheim, Norway.
van den Burg, S., Dagevos, H. and Helmes, R. (2019). Towards sustainable European seaweed value chains: a triple P perspective. ICES Journal of Marine Science fsz183.
Rey, F., Lopes, D., Maciel, E., Monteiro, J., Skjermo, J., Funderud, J., Raposo, D., Domingues, P., Calado, R. and Domingues, M. (2019). Polar lipid profile of Saccharina latissima, a functional food from the sea. Algal Research, 39, p.101473.
Fort, A., Mannion, C., Fariñas-Franco, J.M. and Sulpice, R. (2019). Green tides select for fast expanding Ulva strains. Science of the Total Environment, 698, 134337.
Bernard, M., Rousvoal, S., Collet, N., Le Goff, T., Jacquemin, B., Peters, A., Potin, P. and Leblanc, C. (2019). A highly prevalent filamentous algal endophyte in natural populations of the sugar kelp Saccharina latissima is not detected during cultivation in Northern Brittany. Aquatic Living Resources, vol. 32, 2019, p. 21.
Fort, A., Lebrault, M., Allaire, M., Esteves-Ferreira, A., McHale, M., Lopez, F., Fariñas-Franco, J.M, Alseekh, S., Fernie, A. and Sulpice, R. (2019). Extensive variations in diurnal growth patterns and metabolism amongst Ulva spp strains. Plant Physiology, pp.18.01513.
2018
Lopes, D., Moreira, A.S.P., Rey, F., da Costa, E., Melo, T., Maciel, E., Rego, A., Abreu, M.H., Domingues, P., Calado, R., Lillebø, A.I. and Domingues, R.M. (2018). Lipidomic signature of the green macroalgae Ulva rigida farmed in a sustainable integrated multi-trophic aquaculture. Journal of Applied Phycology, 31(2), pp.1369–1381.
Fort, A., Guiry, M.D. and Sulpice, R. (2018). Magnetic beads, a particularly effective novel method for extraction of NGS-ready DNA from macroalgae. Algal Research, 32, pp.308–313.